Capacity Development is needed in the Iranian Agricultural System. Integrating Information and Communication Technologies (ICTs) in the agricultural research system is an appropriate capacity development mechanism. The appropriate application of ICTs and information such as a National Agricultural Information System requires a systemically developed strategic plan, based on identifying and recognizing system-wide organizational implications. In this regard, this paper focuses on the implications of integrating ICTs in the Iranian agricultural research system. To this aim, the authors conducted a survey research study using qualitative analysis of interview data from a select sample of agricultural researchers and agricultural faculty members. After designing an interview protocol and doing interviews with the select sample of agricultural researchers and faculty members (n = 29), a qualitative procedure was used to analyze the data, based on conceptual extraction and thematic categorization of statements. Categories included guidelines, expected outcomes, challenges and barriers of appropriate ICTs integration in the Iranian agricultural research system. In addition, different phases of the ICTs integration process were identified in the form of a pathway diagram. Finally, based on related Iranian lessons learned, which are explained in this research, some appropriate mechanisms for integrating ICTs in national agricultural research system were indicated. (Contains 2 figures.)