Jose Maria Albareda (1902-1966) was an applied chemist and a prominent member of the Roman Catholic organization, Opus Dei, who played a crucial role in organizing the Consejo Superior de Investigaciones Cientficas (CSIC), the new scientific institution created by the Franco regime in 1939. The paper analyses first the formative years in Albareda's scientific biography and the political and social context in which he became an Opus Dei fellow. Then it discusses the CSIC's innovative features compared with the Junta para Ampliacin de Estudios (JAE), the institution in charge of scientific research and science policy in Spain from 1907 up to the Civil War (1936-1939). Next it goes into Albareda's ideas about science and science policy. Finally, it shows how they shaped the organization of the CSIC, of which Albareda was the General Secretary from 1939 to his untimely death in 1966. (Contains 107 footnotes.)